Additional Installations

All required packages are available in DOWNLOADS.


SiteTear (for using the ALUMNI script on physrun):

0. Log into physrun

1. Install perl and its libs:
>> yum install perl perl-libwww-perl

2. get and install in this order
http://search.cpan.org/~kasei/Class-Accessor-0.31/lib/Class/Accessor.pm
http://search.cpan.org/~tkurita/HTML-Copy-1.22/lib/HTML/Copy.pm
http://search.cpan.org/~tkurita/HTML-SiteTear-1.42/lib/HTML/SiteTear.pm

For each one of the above run
>>   tar zxvf filename.tar.gz ; cd filename
>>   perl Makefile.PL
>>   make
>>   make test
>>   make install

3. In "/usr/bin/sitetear" replace the first line
#!/usr/bin/env perl -w
by
#!/usr/bin/perl -w



MySQL (following instructions from Miki Lewinger):

relocating the whole MySQL database

on physweb:
on physnet:

relocating the forum

on physweb:
on physnet:
The phpbb will work automatically with the new mysql,
since all the relevant setup is in /var/lib/mysql/mysql.
Neither I saw anything that should be changed in /etc/php.ini
 

Installation of TeTex (by Michael Gedalin):                   

                                                                                                                                          
mkdir -p /usr/local/teTeX/share/texmf
mkdir -p /usr/local/teTeX/share/texmf-dist
mkdir -p /usr/local/teTeX/share/texmf-local/tex/generic
mkdir -p /usr/local/teTeX/share/texmf-local/tex/latex
mkdir -p /usr/local/teTeX/share/texmf-local/doc
mkdir -p /usr/local/teTeX/share/texmf-local/bibtex
mkdir -p /usr/local/teTeX/share/texmf-local/fonts/tfm
mkdir -p /usr/local/teTeX/share/texmf-local/fonts/afm
mkdir -p /usr/local/teTeX/share/texmf-local/fonts/type1
mkdir -p /usr/local/teTeX/share/texmf-local/fonts/type1
mkdir -p /usr/local/teTeX/share/texmf-local/fonts/map
mkdir -p /usr/local/teTeX/share/texmf-local/fonts/enc/dvips  

DOWNLOADS

tetex-texmf.tar.gz
tetex-src.tar.gz 
ivritex.tgz
ucs.tgz

cd your_download_dir  
gzip -dc tetex-texmf.tar.gz | (umask 0; cd /usr/local/teTeX/share/texmf-dist; tar xvf -)
gzip -dc tetex-src.tar.gz | tar xvf -
gunzip ucs.tgz; tar -xvf ucs.tar
gzip -dc ivritex.tgz | tar xvf -           

# lengthy compilations                                                                      
cd tetex-src-*
sh -c './configure --prefix=/usr/local/teTeX >configure.log 2>&1'
sh -c 'make world >world.log 2>&1'
 
(if required)                                                                            
mv /usr/local/teTeX/bin/i586-pc-linux-gnu  /usr/local/teTeX/bin/i686-pc-linux-gnu
                                                                              
mv ucs  /usr/local/teTeX/share/texmf-local/tex/latex/ucs
mv ivritex_generic /usr/local/teTeX/share/texmf-local/tex/generic/ivritex
mv ivritex_latex /usr/local/teTeX/share/texmf-local/tex/latex/ivritex
mv ivritex_doc /usr/local/teTeX/share/texmf-local/doc/culmus
mv ivritex_bibtex /usr/local/teTeX/share/texmf-local/bibtex/culmus
mv culmus_tfm /usr/local/teTeX/share/texmf-local/fonts/tfm/culmus
mv culmus_afm /usr/local/teTeX/share/texmf-local/fonts/afm/culmus
mv culmus_type1 /usr/local/teTeX/share/texmf-local/fonts/type1/culmus
mv culmus_KLM_type1 /usr/local/teTeX/share/texmf-local/fonts/type1/culmus_KLM
mv culmus_map /usr/local/teTeX/share/texmf-local/fonts/map/culmus
mv culmus_enc /usr/local/teTeX/share/texmf-local/fonts/enc/dvips/culmus

cd                                                                             
pico .cshrc
setenv PATH /usr/local/teTeX/bin/i686-pc-linux-gnu:$PATH
setenv MANPATH /usr/local/teTeX/man    #or append :$MANPATH
setenv INFOPATH /usr/local/teTeX/info  #or append :$INFOPATH
(save .cshrc)                                                                              
source .cshrc

texconfig confall                                                                                    
texhash                                                             
updmap --enable Map culmus.map

Additional packages (e.g. iopart) should be placed in
/usr/local/teTeX/share/texmf-local/tex/latex/


Special installations and scripts (by Doron Cohen):

Still on the tzin server:

Forum phpbb files that were modified:

index.php
portal.php
language/lang_english/lang_main.php
templates/fisubsilversh/overall_header.tpl
templates/fisubsilversh/index_body.tpl
templates/fisubsilversh/viewonline_body.tpl
templates/fisubsilversh/overall_footer.tpl
templates/fisubsilversh/images/phpbb2_logor.jpg
images/banner/phpbb2_banner_486.gif
REGISTER.html
? profile.php
? includes/page_header.php
? Update/update_phpbb_208_to_plus_152.php

adding mimetex directory and associated changes
http://www.mayer.dial.pipex.com/latexrender.zip 


Mozilla plugins:

Installation of wv:
download wv-1.0.0.tar.gz
more INSTALL
./configure
make
make install
ln -s wvHTML


Installation of browseMSword
former name msdoc2html.scr


Installation of Itex:
open itex2mml.tar
cd itex
make
ln -s  tidy
ln -s  itex2MML


Installation of  itex2xml:
edit  xml_header.xml
edit  itex2xml.scr


Installation of  itex2latex:
edit  latex_header.tex
edit  itex2latex.scr


Installation of libraries (by Erez Gilad):


All files can be found on the physics server in:
/users/physics/gilade/software/

NOTE: Installation of the various libraries should be done in the order they appear.

Intel Fortran Compiler Version 8.0
==================================
l_fc_p_8.0.034.tar.gz - source files
l_for_03492674.lic - license file

see: http://www.intel.com/software/products/compilers/flin/
for help on installation and usage (product/technical information).
NOTE: Debugger installation is also required.

Intel C/C++ Compiler Version 8.0
================================
l_cc_p_8.0.055.tar.gz - source files
l_cpp_36672736.lic - license file

see: http://www.intel.com/software/products/compilers/clin/
for help on installation and usage (product/technical information).
NOTE: Debugger installation is also required.

PGI workstation for linux (including Fortran/C/C++ compilers/debuggers) - optional
=========================
linux86.tar.gz - source files

see: http://www.pgroup.com/support/download_release.php
for help on installation and usage.

FFT library - FFTW 3.0.1
========================
fftw-3.0.1.tar.gz - source files

see: http://www.fftw.org
for help on installation and usage.

NOTE: This library should be compiled by the GNU, Intel & PGI separately!
Installation must include Fortran interface.

MPI implementation - MPICH-1.2.5.2
==================================
mpich.tar.gz - source files

see: http://www-unix.mcs.anl.gov/mpi/mpich/ http://www-unix.mcs.anl.gov/mpi/
for help on installation and usage.

NOTE: This library should be compiled by the GNU, Intel & PGI separately!
Installation must include Fortran interface.

ADIC 1.1 - automatic differentiation (to be used by PETSc)
====================================
adic1.1b4-linux.tar.gz - source file

see: http://www-fp.mcs.anl.gov/adic/
for help on installation and usage.

NOTE: This library should be compiled by the GNU, Intel & PGI separately!

BlockSolve95 - Block preconditioner (to be used by PETSc)
===================================
BlockSolve95.tar.Z - source file

see: http://www-unix.mcs.anl.gov/sumaa3d/BlockSolve/
for help on installation and usage.

NOTE: This library should be compiled by the GNU, Intel & PGI separately!

PETSc - numerical library
=========================
petsc.tar.gz - source files
petsc_patch_all-2.2.0 - patches

see: http://www-unix.mcs.anl.gov/petsc/petsc-2/index.html
for help on installation and usage.

NOTE:
1) This library should be compiled by the GNU, Intel & PGI separately!
2) Should be configured to be able to use ADIC and BlockSolve95.





Installation of Xft Mozilla:

http://www.braindrain.be/mozilla/
Mozilla 1.8 alpha-3 Xft & Gtk2: tar.bz2
tar xvfj
mkdir  /usr/local/mozilla18
./mozilla to activate


Installation of MathML fonts:

mkdir /usr/lib/X11/fonts/MathML
cd /usr/lib/X11/fonts/MathML
wget http://support.wolfram.com/mathematica/systems/windows/general/MathFonts_TrueType.exe
wget http://www.mozilla.org/projects/mathml/fonts/bakoma/texcm-ttf.zip
unzip texcm-ttf.zip
unzip MathFonts_TrueType.exe
cp /usr/X11R6/lib/acroread/Resource/Font/Symbol .

edit /etc/fonts/local.conf as follows
<fontconfig>... <dir>/usr/lib/X11/fonts/MathML</dir></fontconfig>


Installation of html2latex:

http://html2latex.sourceforge.net/

# installing required modules
perl -MCPAN -e shell
install HTML::TreeBuilder
install XML::Simple

# installing html2latex
cd HTML
perl Makefile.PL
make install
cd ..
cp html2latex /usr/bin
chmod +rx /usr/bin/html2latex
cp html2latex.1 /usr/man
chmod +r /usr/man/html2latex.1



Enabling the Xprint in Mozilla:
add the line user_pref("print.print_method", 1); in mozilla preferences file.
can be done in prefs.js, but recommended to do it in user.js

no longer required???